Geoff's Bio-Directories (By Geoffrey Routh, Ph.D)

Lists of Genomics Software/Service Providers

Thank you for dropping by!  My goal for this page is to create the most comprehensive list of bioinformatics companies and genomics service providers that I can.  You will also find a short list of other sites that can help you identify additional software, consumable, instrument, and service providers.  Other pages on this site ("Genome Inst/Supplies" or "Institute List") contain directories of research institutes, instrument makers, and reagent providers.  

Please contact me ( if you know of companies or institutions that belong here. 

If you work for a company or organization listed on these pages, you are welcome to recommend edits to the notes describing your employer. 

If you want to go back to the home page and look for a different list, go

For tweeted updates:
Name Website Notes
Abiomics Bioinformatics
Accelerys Bioinformatics
Active Motif Acquired TimeLogic
AgileBio Custom bioinformatics
Annai Systems Genome data management (Developed UCSC Cancer Genomics Hub)
Appistry Data management, analysis, interpretation & storage (NGS/Other)
Ariadne Genomics Expression, pathways, text mining
aScidea Bioinformatics solutions including NGS products
Aspera Fast efficient method for high-speed data transfer
AssurX Risk and compliance management software for clinical NGS
Atragene Custom software solutions (NGS interpretation?)
Avadis NGS through pathway analysis
Baseclear NGS, comprehensive 
Bina Technologies NGS interpretation, comparison
Biobase Identify functionally significant genome variants 
Biocomputing Platforms Ltd NGS and variation data analysis and management
BioCOS Life Sciences NGS and microarray interpretation
BioDiscovery Copy number, expression, NGS
Bioinformatics Solutions Mapping
Biomatters Producers of Geneious
Biomol-Informatics including NGS analysis
BioNeos Custom bioinformatics
Bionivid Bioinformatics services and development
Biosof Sequence Analysis, Structure and Function Prediction
Bioteam MiniLIMS for NGS platforms
BMR Genomics Assembly through interpretation
Cartagenia web-based software and database, for diagnostic genome interpretation
cBio bioinformatics solutions (NGS and microbial diagnostics)
ChunLab  NGS data analysis solutions
CLC Bio Comprehensive, Including NGS
Conexio Genomics Next gen software for HLA and other applications
CSBI Link dead as of June 2013 Software and training in bioinformatics
Cypher Genomics Interpretation of NGS data, clinical
Diagnomics Software and service for NGS and personalized healthcare
DNA 2.0 Tools for gene design through sequence analysis
DNA Guide Bring NGS to clinic
DNAlytics  Data Mining & IT solutions for personalized medicine
DNAnexus Cloud-based DNA data management, analysis, and collaboration platform
DNASoftware  Multiple DNA analysis packages
DNAstar NGS, assembly, other
Douglas Scientific Microarray, qPCR etc
Eagle Genomics Pipelines, consulting, scalable genomics analysis
ecSeq Bioinformatics  NGS interpretation, custom pipelines
Enlis Genomics Powerful and simple NGS interpretation software
Era7 Bioinformatics Bacterial genomics
Euformatics Software platforms for NGS (research and clinical)
Existance Genetics Bankrupt.  Website offline Tertiary analysis (clinical interpretation) and reporting of NGS data
Fluidigm Expression, targeted resequencing, SNP
Gataca database construction, genomic analysis, bioinformatics algorithm construction
GE Healthcare Bring NGS to clinic
Genalice BV very accurate and fast (up to 100 x faster than BWA) short read aligner
Genbios databases of genes, pathways etc.
GenDx HLA typing
Gene Codes  Bioinformatics software for DNA sequence analysis
GeneExplain Expression, proteomics
GeneGo (Thomson Reuters) pathway analysis
Geneious NGS assembly through annotation
GeneSpring (Agilent) Gene expression, NGS and proteomics analysis, pathways
Genevia Technologies systems biological data analysis
GenoLogics LIMS systems for -omics labs
Genomatix NGS analysis software
Genome Enterprise Limited NGS analysis associated with TGAC
GenomeQuest NGS: research and clinical applications
Genomic Expression Proprietary cost-effective genomics diagnostics
Genomic Solutions proteomics, DNA sample prep
GenoSpace Cloud based 'omics secure data sharing targeting clinical applications
Genostar Solutions for microbial genome, proteome and metabolome comparison
Geospiza NGS/Microarray analysis and LIMS software
GNS healthcare Big Data management devoted to healthcare solutions
Golden Helix Multiple genomics packages
Heracle BioSoft S.R.L. Heracle makes DNABaser Assembly software
Igenbio.Inc Advanced bioinformatics services
Ingenuity Systems Genome, pathway analysis
InSilicoDB Genomics databases and in-silico genomics tools
Integromics Data handling and analysis for NGS, microarray, qPCR
Interactive Biosoftware Visualization, interpretation and annotation of NGS data
Intrepid Bioinformatics  NGS, SNP, Databases
IntuitiveGenomics NGS assemply, annotation, interpretation
Invitae Working with Genomic Health and Locus Dev. (variant database)
JMP Genetics Solutions for research, clinical, and agricultural genomics
JSI Medical Systems NGS analysis software
Knome NGS interpretation, clinical
Korilog Products based on Klast high perfomance Seq. Comparison tool
Kovid Bioanalytics Statisitical Analysis, Genomics Data Mining, Clinical Informatics
Lab 7 systems Integrates multiple NGS software packages coherently
Leucine Rich Bio  heuristic and statistical analysis of omics data and basic bioinf
Locus Development Bring NGS to clinic
Maverix Biomics Cloud-based NGS data management, interpretation, and visualization
Microsoft Genomics
MolecularHealth Molecular safety, molecular oncology
MultiD Analyses qPCR analysis software
NextBio Genomics, expression, literature, clinical
NuMedii Genome-wide molecular profiles
Ocimum Biosolutions Research Accelerator (for 'Omics comparison), extensive databases
Omicia VAAST genome interpretation
Omixon Targeted sequencing, HLA, variant analysis
OncoDNA Software packages for deep sequencing and cancer biomarker monitoring
Partek Software - NGS, expression etc.
Personalis Interpretation of NGS data, clinical
Phenosystems Software NGS and others
Premier Biosoft Bioinformatics
Real Time Genomics Sequence alignment through variant database comparison
Rimarcable Custom Software solutions (including healthcare applications)
Salsa Computing  Big data, including bioinformatics
Samsunggenome NGS sequencing through interpretation
Sapio Sciences LIMS systems for genomics labs
Scale Genomics  Cloud storage and analysis of NGS data (Domain seems to be parked)
ScaleMP Big data company, assembly through interpretation
Seven Bridges Genomics NGS variant interpretation open source pipelines
SGI Http:// Big data company, assembly through interpretation
Silicon Valley Biosystems NGS interpretation software 
SimulConsult Genomic variant interpretation, phenomics
Simulconsult Sofware packages to help clinicians interpret genetic variant tables
Soft Genetics Inc NGS interpretation software packages
SolveBio Genome analysis 
Spiral Genetics Annotation
StationX Genome interpretation 
Strand Life Sciences Genespring, Avadis-NGS
Syapse Making omics data actionable in clinical research and development
TechTrendsIT Software builders.  Can assist with cloud computing and big data etc.
Translational Software Bring NGS to clinic
Woodward Informatics Ltd Custom bio- and chemo-informatics
xGen Cybernetics Bioinformatics, clinical genetics and predictive medicine
Zymo Research Bioinformatics for all NGS applications/epigenetic analysis
Other resources for locating and evaluating NGS tools and services
Resource Website Notes
Allseq (formerly Blueseq) Match sequencing capacity with sequencing need (advisors)
Omictools Excellent set of lists of structural and functional genomics tools
Omicsmaps Interactive world map of NGS Instruments
Seqanswers One of the oldest and most popular NGS forums
Genomics Service Providers
Company Website Notes
23 and me Consumer genomics
5am Solutions Custom bioinformatics
Active Motif ChIP-Seq, (h)MeDIP-Seq and Bisulfite Sequencing among others
Adaptive Biotechnologies NGS on immune cells, moving to clinical
Allere Laboratory NGS - Based health and wellness
AllGenetics Molecular genetics support for academic and corporate labs
Almac group CLIA lab, microarray including CNV and SNP 
Ambry Genetics Clinical Genetics and Genomics Services Integrating geneologies with DNA analysis
Applied Genomics Institute NGS and related BioInformatics
Applied Microarrays Custom microarray
Ariana Pharma Multiple research/clinical genomics applications
AROS Applied Biotechnology Extraction, PCR, microarray, and NGS services.
Asuragen Clinical NGS, ion torrent, FFPE capabilities
Atlas BioLabs NGS, Arrays, CGH, Bioinformatics
BairesDev BairesDev can develop software and web-apps for your algorithm
Baseclear NGS, comprehensive 
Beckman Coulter Genomics NGS, Sanger sequencing, data analysis, other
Beijing Genomics (BGI) NGS through assembly, interpretation
Bina Technologies NGS interpretation, comparison
Bio S & T Sanger sequencing and expression, WGS?
BioChain NGS through genome interpretation
BioCOS Life Sciences NGS and microarray interpretation
BioDigital valley Proteomics, Genmics, Bioinformatics
Biodiscovery Genomics analysis consulting
Bioo Comprehensive including NGS
Bioserve human DNA, microarray
BMR Genomics NGS through interpretation
Caliper (PE) Lab auto and NGS services
Cartagenia Enterprise integration of clinical NGS
CCCB - Harvard Computational biology services for industry and academe @ Harvard
Centrillion Biosciences experimental design, data production and bioinformatic services
ChunLab  Next gen sequencing and analysis services
Cofactor Genomics NGS, bioinformatics
Complete Genomics NGS through assembly (Subsidiary of BGI)
Computomics NGS interpretation for agricultural biotech
Contig Express Integrated genomics data service provider
CorrZ Biostatistics, analysis for NGS and microarray
Counsyl Carrier Screening via NGS or Targeted Genotyping
Courtagen NGS through interpretation, proteomics
Covance Genomics Full gervice genomics partner
CPGR Non profit genomics/bioinformatics center
Creative Bioinformatics Consultancy that will tailor a bioinformatics team to your project.
Cypher Genomics Interpretation of NGS data, clinical
Cytogenomics High throughput interpretation of genomic variation
Data2Bio Design, Execute, analyse NGS projects
deCode Genetics Clinical genomics
Decode Nomics  Expired Website Bioinformatics analysis services 
DNA Link NGS, microarray, personal genomics, forensics etc.
DNAlytics  Data Mining & IT solutions for personalized medicine
DNASTAR Genome Assembly Services (and sequencing, downstream analysis etc.)
ecSeq Bioinformatics Sequencing- assembly and analysis
Edge Bio CLIA exome sequencing
Era7 Bioinformatics Bacterial genomics
Euformatics Consultation on NGS projects
Eureka Genomics NGS through assembly, other
Eurofins, MWG, Operon Oligos through NGS analysis
Evogene Identify agrinomically imortant plant genes
Expression Analysis WGS, RNAseq, microarray
Eye.Q.Consulting Website Pending Biological interpretation of array data
Fasteris  Including Illumina NGS
Fios Genomics  Exome, methylation for epigenetics, other
FitGenes DNAprofiling, Nutrigenomics
Floragenex Plant and animal NGS
Foundation Medicine Cancer diagnostics (including NGS)
Ganit labs Expression, NGS, genotyping
GATC-Biotech NGS
GenAlysis Veterinary genetic testing 
Genbios Custom database creation service
Gene TLC Personalized genomics
GenebyGene Services include Ancestry, Health, Research, and Paternity
GeneDx Clinical - including whole exome
Genergy Bio-tec  We prowide GWAS, NGS service
GeneWiz DNA services including NGS
Genialis Develops interactive visual analytics web applications and analyses NGS data
Genialis Bioinformatics services as well as stand alone analysis products
Genohub Helps researchers identify the best services for their NGS project
Genomatix NGS analysis services
Genome British Columbia Investment and management of genomics projects
Genome Enterprise Limited Next Gen Sequencing associated with TGAC
Genome International Corporation Bioinformatics support for the life sciences
Genome Life Sciences Bioinformatics support for the life sciences
Genome Project Solutions NGS sequencing though interpretation
GenomeDX Clinical cancer genomics
Genomic Express CLIA laboratory, consumer genomics, medical genetics 
Genomic Expression NGS libraries
Genomic Health  Clinical genomics
Genomic Health Clinical genomics
Genomnia NGS sequencing through interpretation
Genoptix Medical Laboratory personalized diagnostics some seq analysis
Genoscreen http:// NGS, interpretation, consultation
GenoSplice technology "Wet" lab and Bioinformatics services
Genostar Solutions for microbial genome, proteome and metabolome analyses
Genotypic NGS, Microarrays, custom microarrays, Bioinformatics, PCR, and more
Genotypic NGS, Microarrays, custom microarrays, Bioinformatics, PCR, and more
Golden Helix Genomic analysis/genomics project consultation
Good Start Genetics Carrier screening
Health In Code Genetic diagnosis of inherited cardiovascular diseases: NGS/Sanger
High Throughput Sequencing Service associated with UW
Holgentech Fractal defect mining, Fractal analytics (cancer)
Hybridstat Software design/bioinformatics consulting
Ibioa CRO, with NGS analysis as one of many services
IDT In addition to Oligos, they do 454 sequencing as well
Igenbio.Inc Advanced bioinformatics services
Illumina NGS
IMBcom Commercialization of academic genomics services
IMGM Laboratories Comprehensive NGS/Bioinformatics provider
Inqaba Biotechnical Industries African NGS and Bioinformatics services
Interleukin Genetics Consumer genetic tests
iRepertoire NGS on immune cells
Keygene Including whole genome sequencing of plants
Knome NGS interpretation, clinical
LabCorp Including clinical genomics
LC Sciences Services include targeted sequencing and custom microarrays
Lexogen RNA-Seq R&D
LGC Genomics Nucleic acid extraction through NGS analysis
Lucigen Library prep through NGS analysis
Macrogen NGS, Sanger sequencing, microarray
Malaysian Genomics Resource Ctr Sequencing through analysis 
Malaysian Genomics... (MGRC) NGS through Interpretation
Medomics Clinical mitochondrial genomics
Metamark Genetics Clinical genomics, cancer focus
MOgene NGS, microarray
MolecularMD Comprensive CRO with significant NGS and bioinformatics capabilities
Moleculo DNA sequencing method:  very long and accurate reads
Multiplicom Dx kits for targeted resequencing.
Mycroarray Custom microarrays and capture bait libraries
Myriad Genetics Clinical Genetics and Genomics Services
Natera Clinical prenatal genetic testing
Navigenics Consumer genomics
Nextcode Delivering the resources developed at deCODE Genetics to the clinical domain.
Novocraft NGS Sequence Analysis and Custom pipelines
Nucleome Informatics Next gen sequencing and data analysis
Ocimum Biosolutions Expression, LIMS, other
Oftalmic Sequencing and analysis services (inherited eye diseases)
Omega Bioservices Exome sequencing, interpretation
Omics Maps Crowd Sourced list of sequencing centers
Omics Systems Comprehensive list of genomics services
OncoDNA Targeted sequencing to exome with oncologic theranostic interpretation
Opgen Genome mapping, assembly
Otogenetics Whole exome NGS, RNAseq
Oxford Gene Technology Whole Exome, Targeted resequencing, microarray, ramily/trio analysis
Paradigm Diagnostics Clinical interpretation of NGS data
Paradigm Nonprofit organization (cancer pathway analysis, genomics, etc.)
Pathgroup Pathology services including clinical NGS
Pathogenica Clinical Sequencing/NGS
Pathtwork Genomics CLIA microarray (RNAseq?)
Pathway Genomics Personal genomics/nutrition
Perkin Elmer NGS sequencing, exome
Personal Genome Diagnostics Clinical cancer exome sequencing through interpretation
Personalis Interpretation of NGS data, clinical
Population Genetics Targeted resequencing of large populations
Prevention Genomics Clinical Genetic Screening
Progenus Sequencing and analysis (Sanger through NGS)
Prognosys NGS Sequencing and analysis services
QFAB Bioinformatics service specialists
qGenomics Genomics for human health
Qtlomics Technology Merging NGS/Bioinformatics with traditional plant breeding
Quality Partner 16S metagenomic analysis applied to food microbiology
Quest Including clinical genomics
QUEST Diagnostics Clinical Diagnostics including clinical genomics (see Genomic Vision)
Raindance Raindance offers design services in addition to instrumentation
Response Genetics Genetic and genomic approaches to cancer diagnostics
Rheumakit NGS-based Rheumatology diagnostics
Samsunggenome NGS sequencing through interpretation
SCR Consulting  Biotech IT service - Builds custom informatics for life scientists
Second Genome NGS with microbiome focus
SEQLAB Including NGS
Sequenom Microarray structural/functional genomics
Sequenta Clinical NGS and immunology
Seqwright NGS through assembly
ServiceXS NGS, genotyping, methylation and expression analysis services
Shanghai Biotech NGS panels and Bioinformatics services
Skuldtech Biomarker Discovery, Diagnostic NGS - very well established
SmartGene application-specific solutions for clinical sequencing
Sophia Genetics Integrated Clinical NGS Dry Lab Service 
Sorensen Genomics Clinical and forensic genomics
Spiral Genetics Annotation
STATSARRAY NGS data analysis services (also maintain omictools database)
Synexa Life Sciences Clinical human genomics
TATAA Biocenter gene expression profiling services
Taueret Laboratories Genetic laboratory services to researchers of medical genetics
UD-GenoMed Full service clinical genomics lab
Wuxi Apptec Comprehensive, including NGS and expression analysis
xcelris labs Sequencing and analysis (Sanger through NGS)
XDx Clinical, expression-based transplant monitoring
Zymo Research Comprehensive NGS services for epigenetic analysis
Providers of cells and protein solutions 
Company Website Notes
AllCells, LLC Largest West Coast hematopoietic stem cell provider
Alstem  Make and distribute monoclonal antibodies
Bioneer ExiprogenTM Automated protein synthesis/purification instrument
Novoprotein custom antibody services and recombinant proteins
Nvigen Nanoparticles (Fluorescent/Magnetic etc.)
ProMab Largest monoclonal antibody supplier
Rest in Peace
Company Notes
Lynx Therapeutic Pioneers in the early 2000s
Manteia Predictive Medicine Pioneers in the early 2000s
Solexa Pioneers in the early 2000s
 Different computers have accessed this list since May 11, 2012.
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